DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsh and CG11085

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:262 Identity:72/262 - (27%)
Similarity:91/262 - (34%) Gaps:93/262 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 STPRS-----------NHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGA 198
            |||.|           :||.|..|.|   |:.|.:....|.:.|...|....       .||.|.
  Fly    41 STPDSTAAGCQQELLLSHHHRRFTHH---DESSVESCLSATRGPGSGTGSGG-------GGGGGG 95

  Fly   199 SNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLG 263
            ..||                      :||         ||.|:        .|.|....|.....
  Fly    96 GGGV----------------------ASG---------LSAAA--------AAAGVAAGLLAAAA 121

  Fly   264 MGVNALRHC----------------------------RRRKARTVFSDPQLSGLEKRFEGQRYLS 300
            .|.|..|..                            :.|:.||.|:..||:.||::|..|:|||
  Fly   122 SGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLS 186

  Fly   301 TPERVELATALGLSETQVKTWFQNRRMKHKK--QLR---RRDNANEPVDFSRSEPGKQPGEATSS 360
            ..:|.::|..|.|||||||||:||||.|.|:  |||   .|..|....||...:.|...|.....
  Fly   187 VADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCP 251

  Fly   361 SG 362
            ||
  Fly   252 SG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.