DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HOXA6

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:190 Identity:53/190 - (27%)
Similarity:78/190 - (41%) Gaps:42/190 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFG----A 251
            |.....|||:   .|:..||...|.|.:...|:.:..:|:.....|.|...|.|.:|...    .
Human    37 PFPASYGASS---LPDKTYTSPCFYQQSNSVLACNRASYEYGASCFYSDKDLSGASPSGSGKQRG 98

  Fly   252 PG----------CVPELALGLGMGVN------------------------ALRHCRRRKARTVFS 282
            ||          ..|:.:.|.|..::                        |:.....|:.|..::
Human    99 PGDYLHFSPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYT 163

  Fly   283 DPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEP 342
            ..|...|||.|...|||:...|:|:|.||.|:|.|:|.||||||||.||: .:..|:.:|
Human   164 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE-NKLINSTQP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 27/55 (49%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 6/37 (16%)
Antp-type hexapeptide 136..141 0/4 (0%)
Homeodomain 156..212 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 2/9 (22%)

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