DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HOXA4

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_002132.3 Gene:HOXA4 / 3201 HGNCID:5105 Length:320 Species:Homo sapiens


Alignment Length:304 Identity:84/304 - (27%)
Similarity:108/304 - (35%) Gaps:88/304 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DQISQQLGSGAA----------QHPPVPTTQPQPPPPPPL-NGGSG-----------ASNGVLYP 205
            ::.:|..|||.|          |.||.|.||..|...|.| :.|.|           .:....||
Human    21 EEYAQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREPAYP 85

  Fly   206 NAP-YTDHGFLQMTLGY---------------------LSPSSGTYKS----------------- 231
            .|. |..||.......|                     ..|:.|.:.|                 
Human    86 AAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVP 150

  Fly   232 -VDPYFLSQASLFGGAPFFG-APGCVPELA----LGL------------GMGVNALRHC----RR 274
             ..|.....|....|.|..| ||.|...||    |||            .:.|:|:...    ..
Human   151 PAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEP 215

  Fly   275 RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNA 339
            :::||.::..|:..|||.|...|||:...|:|:|..|.|||.|||.||||||||.||. .:..|.
Human   216 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD-HKLPNT 279

  Fly   340 NEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTS 383
            ......|.|.....||:|.:   .|.|...:|.....||. |:|
Human   280 KMRSSNSASASAGPPGKAQT---QSPHLHPHPHPSTSTPV-PSS 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/55 (51%)
HOXA4NP_002132.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..77 16/55 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..168 7/66 (11%)
Antp-type hexapeptide 194..199 0/4 (0%)
Homeodomain 216..272 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..320 13/52 (25%)

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