Protein Alignment bsh and pdx1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_571518.2
• Gene: pdx1 / 30721
• ZFINID: ZDB-GENE-990415-122
• Length: 246
• Species: Danio rerio
• Alignment Length: 310
• Identity: 68/310 - (21%)
• Similarity: 100/310 - (32%)
• Gaps: 115/310 - (37%)

  Fly   104 QHSHPP----------QSHPPASASASATATARSNQAASGYAG---------------------E 137
            :|.:||          |.||....|.:........||.|.||.                     :
Zfish     5 EHYYPPNHLYKDSCAFQRHPNEDYSQNPPPCLYMRQAHSVYASPLGAQDQPNLTDITSYNMSSRD 69

  Fly   138 DY-GKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNG 201
            |. |..:| .|:::..|......| ||.: ...|.....|.|.|
Zfish    70 DLAGPHLH-LPQTSQTSLQSLGGY-GDSL-DLCGDRNRYHLPFP--------------------- 110

  Fly   202 VLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGV 266
                        :::.|..:.....|.:  ..||.:...
Zfish   111 ------------WMKSTKSHTHAWKGQW--TGPYMVEAE-------------------------- 135

  Fly   267 NALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKK 331
                  ..::.||.::..||..|||.|...:|:|.|.|||||..|.|:|..:|.||||||||.||
Zfish   136 ------ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWFQNRRMKWKK 194

  Fly   332 QLRRRDNANEPVDFSRSEPGKQPGEATS-SSGDSK-HGKLNPGSVGGTPT 379
            :           :..|...|..|.:.:| :|||.| ...:...::.|.|:
Zfish   195 E-----------EDKRRARGVDPEQDSSITSGDLKDESCVGTATLAGPPS 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	28/55 (51%)
pdx1	NP_571518.2	Homeodomain	138..194	CDD:459649	28/55 (51%)