DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and dlx5a

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_571381.2 Gene:dlx5a / 30569 ZFINID:ZDB-GENE-990415-49 Length:282 Species:Danio rerio


Alignment Length:319 Identity:92/319 - (28%)
Similarity:125/319 - (39%) Gaps:107/319 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYN 161
            ||.:..:.| ||.|..|....|   |||      .|||          .:|....|  ||....|
Zfish    19 NPFQLSTMH-HPSQESPTLPES---TAT------DSGY----------YSPAGGVH--HGYCSPN 61

  Fly   162 GDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSS 226
            .....:.|.:...|:..|             ||.||..:...||     |:|  ..:..| ...:
Zfish    62 SGTYGKPLNAYQYQYHGV-------------NGSSGNYSAKSYP-----DYG--SYSTAY-HQYA 105

  Fly   227 GTYKSVDPYFLSQASLFGGAPFFGAP----GCVPELALGLGMGVNALRHCRRRKARTVFSDPQLS 287
            |||..|.    ||.|          |    ...||:.:     ||. :..:.||.||::|..||:
Zfish   106 GTYNRVQ----SQPS----------PQEKETAEPEVRM-----VNG-KPKKVRKPRTIYSSFQLA 150

  Fly   288 GLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRS---- 348
            .|::||:..:||:.|||.|||.:|||::||||.||||:|.|.||.::   |...|.:.|.|    
Zfish   151 ALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKRSKLKKIMK---NGELPPEHSPSSSDP 212

  Fly   349 ------------------EPGKQPG----------EATSSSGDSKHGKLN-----PGSV 374
                              .|..||.          |:.|||..|..|.:|     ||::
Zfish   213 MACNSPQSPAVWDSQGPQRPHHQPQNINTAASTFLESASSSWYSSTGAMNSHLQAPGTL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
dlx5aNP_571381.2 DLL_N 31..117 CDD:463567 33/141 (23%)
Homeodomain 138..194 CDD:459649 31/55 (56%)

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