DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and dbx1b

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_571253.1 Gene:dbx1b / 30416 ZFINID:ZDB-GENE-000128-11 Length:322 Species:Danio rerio


Alignment Length:305 Identity:86/305 - (28%)
Similarity:118/305 - (38%) Gaps:82/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 PKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKS 142
            |.:.::|..:..|....|......|:...|  :|.|..|||..||.....|..:|         :
Zfish    26 PPALQSAFTTHSSFLVEDLLRISRPAAFMH--RSIPSPSASPPATGVTTLNTTSS---------A 79

  Fly   143 MH---STPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLY 204
            :|   ||..:...|...|| .:.|....:.|..|.    :.:|.....||||:.|    .|...:
Zfish    80 VHVAMSTALAKRSSSPQTS-ISSDPNYLKFGVNAI----LASTTRNASPPPPVQG----MNAKTF 135

  Fly   205 PNAPYTD---HGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCV--PELALGLGM 264
            | .|..|   |.|::.:                ||.:.:|   ..|.   ||..  |..|.|   
Zfish   136 P-FPCFDGSFHPFIRAS----------------YFPASSS---AVPI---PGTFAWPLTARG--- 174

  Fly   265 GVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKH 329
                 :..|....|.||||.|...|||.|:.|:|:|.|:|.:|||.|||.::|||.||||||||.
Zfish   175 -----KPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLATKLGLKDSQVKIWFQNRRMKW 234

  Fly   330 KKQLRRRDNANEPVDFSRSEPGKQPGEATSSSG---DSKHGKLNP 371
            :....|                    |..||.|   .:...|:||
Zfish   235 RNSKER--------------------ELLSSGGCREQTLPTKMNP 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 32/55 (58%)
dbx1bNP_571253.1 COG5576 <173..296 CDD:227863 42/115 (37%)
Homeodomain 182..236 CDD:459649 32/53 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..266 8/42 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..322
Blue background indicates that the domain is not in the aligned region.

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