Protein Alignment bsh and Hoxb3

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 308
• Identity: 93/308 - (30%)
• Similarity: 113/308 - (36%)
• Gaps: 93/308 - (30%)

  Fly   123 ATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHG--------TSHYNGD-QIS----QQLG---- 170
            ||...|.||:.:.|      ..|.|.||.....|        .:|..|| |.|    |.||
  Rat     4 ATYYDNTAAALFGG------YSSYPGSNGFGYDGPPQPPFQAATHLEGDYQRSACSLQSLGNAAP 62

  Fly   171 -------SGAAQHPPV-PTTQPQPP--PPPPL----------NGGS---------GASNGVLYPN 206
                   :|:...|.: |...|.||  |||..          |||.         |||:     |
  Rat    63 HAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNNGGGPSKSGPPKCGASS-----N 122

  Fly   207 APYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMG---VNA 268
            :..|...|..|.   .|..:...|:..|   ..|...||....|..|.......|.|.|   .:.
  Rat   123 STLTKQIFPWMK---ESRQTSKLKNSSP---GTAEGCGGGGGGGGGGGSSSGGGGSGGGGGDKSP 181

  Fly   269 LRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQL 333
            ......::|||.::..||..|||.|...|||..|.|||:|..|.|||.|:|.||||||||:||.
  Rat   182 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKD- 245

  Fly   334 RRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQP 381
                             .|..|.|:||.|.|.         .|:|.||
  Rat   246 -----------------QKAKGLASSSGGPSP---------AGSPPQP 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)
Hoxb3	NP_001100512.1	Homeodomain	188..244	CDD:459649	31/55 (56%)
		DUF4074	365..427	CDD:463833