Protein Alignment bsh and hoxc6a

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_571198.1
• Gene: hoxc6a / 30346
• ZFINID: ZDB-GENE-990415-113
• Length: 231
• Species: Danio rerio
• Alignment Length: 266
• Identity: 63/266 - (23%)
• Similarity: 90/266 - (33%)
• Gaps: 126/266 - (47%)

  Fly   192 LNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSV-----------------DPYFLSQ 239
            |:||.     .:.||.|.               :|.||.||                 .|::..|
Zfish    14 LSGGQ-----EVLPNMPL---------------NSTTYDSVRHFSSYGTTVTQNRIYASPFYSPQ 58

  Fly   240 AS-LFGGA--PF-FGA----------PGCVPELALGLGMGVNALRHCR----------------- 273
            .: :||.:  |: :|:          |.|     ....||:||..|..
Zfish    59 DNVVFGSSRGPYEYGSNVFLQDKDVLPSC-----RQTSMGLNAQSHVAQEYNLEQARAGTQDQKA 118

  Fly   274 -----------------------RRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSE 315
                                   ||:.|.::|..|...|||.|...|||:...|:|:|.||.|:|
Zfish   119 NNIQIYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTE 183

  Fly   316 TQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQ 380
            .|:|.||||||||.||:          .:.:.:.||      |.|:              |||.:
Zfish   184 RQIKIWFQNRRMKWKKE----------TNLTSTVPG------TESA--------------GTPQE 218

  Fly   381 PTSEQQ 386
            ...|.:
Zfish   219 TEKETE 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	28/55 (51%)
hoxc6a	NP_571198.1	Antp-type hexapeptide	123..128		0/4 (0%)
		Homeodomain	143..199	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	200..231		8/55 (15%)