Protein Alignment bsh and hoxc4a

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 301
• Identity: 74/301 - (24%)
• Similarity: 108/301 - (35%)
• Gaps: 102/301 - (33%)

  Fly    74 NNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGED 138
            |:|.|:.|......||      ::.::|..|..:||:                     :.|....
Zfish    26 NSYIPEHSPEYYSRAR------DSGYQHHHQELYPPR---------------------ASYQERQ 63

  Fly   139 YGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSG---AAQHPPVPTTQPQP----------PPPP 190
            |  :..|.|..:....||..|     ....||.|   :.:.||:|.:...|          .|..
Zfish    64 Y--NCASIPEPDTQRGHGLPH-----AGHLLGKGQSASCEPPPLPLSPATPSAASSACNQATPEH 121

  Fly   191 PLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCV 255
            | |..:.|...|:||          .|...::|..:.:|...:|
Zfish   122 P-NSSASAKQPVVYP----------WMKKIHVSTVNSSYNGAEP--------------------- 154

  Fly   256 PELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKT 320
                               :::||.::..|:..|||.|...|||:...|:|:|.:|.|||.|:|.
Zfish   155 -------------------KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKI 200

  Fly   321 WFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSS 361
            ||||||||.||..|.   .|..|. |.|..|...|..|||:
Zfish   201 WFQNRRMKWKKDHRL---PNTKVR-SSSSTGISSGSNTSSA 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	27/55 (49%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		14/64 (22%)
		Antp-type hexapeptide	133..138		2/14 (14%)
		Homeodomain	155..211	CDD:459649	27/55 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		10/30 (33%)