DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and hoxb2a

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:290 Identity:87/290 - (30%)
Similarity:108/290 - (37%) Gaps:68/290 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHP 177
            ||...:..:.:....|||               .|||...:..     ||.|:..|         
Zfish    45 PPFEHTIPSLSPCTGNQA---------------RPRSQKRTAS-----NGLQLRTQ--------- 80

  Fly   178 PVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLS---PSSGTYKSVDPYFLSQ 239
            ..|.||.| ..|.||:||           ||.. |.|..|.....|   |..|...:......||
Zfish    81 TAPPTQHQ-QGPAPLSGG-----------APLA-HEFPWMKEKKSSKKCPKPGATAAAAAASPSQ 132

  Fly   240 ASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPER 304
            ||.........:|   .|:..||. .|:.     .|:.||.:::.||..|||.|...:||..|.|
Zfish   133 ASSGYTTAGLESP---TEIQGGLD-NVSG-----SRRLRTAYTNTQLLELEKEFHFNKYLCRPRR 188

  Fly   305 VELATALGLSETQVKTWFQNRRMKHKKQL--RRRDNANEPVDFSRSEPGKQPGEATSSSGD-SKH 366
            ||:|..|.|:|.|||.||||||||||:|.  .|.....||..|...|........:|.|.: |..
Zfish   189 VEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDGQEGEPSGFDLLEGTDASSPYSSQSLEVSGS 253

  Fly   367 GKLNPGSVGGTPT-----------QPTSEQ 385
            |...|......||           |||.|:
Zfish   254 GSAAPSESETCPTTAAYTNSSDKSQPTPEE 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 8/47 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 10/30 (33%)
Antp-type hexapeptide 103..108 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 11/50 (22%)
Homeodomain 159..215 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 21/73 (29%)
PRK11907 237..>320 CDD:237019 11/47 (23%)

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