Protein Alignment bsh and hoxb1a

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_571190.2
• Gene: hoxb1a / 30337
• ZFINID: ZDB-GENE-990415-101
• Length: 316
• Species: Danio rerio
• Alignment Length: 359
• Identity: 101/359 - (28%)
• Similarity: 126/359 - (35%)
• Gaps: 119/359 - (33%)

  Fly    73 TNNYAPKSSRNAVKSA-----RSAFAHD-------------NNP------HKHP----SQHSHPP 109
            ||.|:||:..:.:..|     .:..|.|             |.|      |:|.    :.|.|..
Zfish    19 TNAYSPKAGYHHLDQAFPGPFHTGHASDSYNADGRLYVGGSNQPPTAAAQHQHQNGIYAHHQHQN 83

  Fly   110 QSHPPASASASATATARSNQAA--SGYAGEDY-------GKSMHSTPRSNHHSRHGTSHYNGDQI 165
            |:....:...:.| |:...||.  |.||...|       |...||   |...:.:.:.||
Zfish    84 QTGMGLTYGGTGT-TSYGTQACANSDYAQHQYFINPEQDGMYYHS---SGFSTSNASPHY----- 139

  Fly   166 SQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHG---------FLQMTLGY 221
                ||.|..:                   .||...|  |.|||..||         :.|.|...
Zfish   140 ----GSMAGAY-------------------CGAQGAV--PAAPYQHHGCEGQDHQRAYSQGTYAD 179

  Fly   222 LSPSSGTYKSVD-PYFLSQASLFGGAPFFGAP---GCVPELALGLGMGVNALRHCRRRKARTVFS 282
            ||.|.||.|..| |   .....|........|   |.|.|..||           .:...||.|:
Zfish   180 LSASQGTEKDTDQP---PPGKTFDWMKVKRNPPKTGKVAEYGLG-----------PQNTIRTNFT 230

  Fly   283 DPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSR 347
            ..||:.|||.|...:||:...|||:|..|.|:|||||.||||||||.||               |
Zfish   231 TKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKK---------------R 280

  Fly   348 SEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQP 381
            .:.|..|..:|||.      .|...|...|.|.|
Zfish   281 EKEGLAPASSTSSK------DLEDQSDHSTSTSP 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	30/55 (55%)
hoxb1a	NP_571190.2	Homeodomain	226..279	CDD:459649	30/52 (58%)