Protein Alignment bsh and hoxd4a

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 262
• Identity: 62/262 - (23%)
• Similarity: 90/262 - (34%)
• Gaps: 88/262 - (33%)

  Fly    74 NNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGED 138
            |:|.|:.|......::      :...:||..:|....|..|.|.|   |....|.| ..|:. :|
Zfish    46 NSYIPEQSPGYYSPSQ------DTDFQHPGIYSRSNYSEQPYSCS---TVQGSSVQ-PRGHV-QD 99

  Fly   139 YGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPP----VPTTQPQPPPPPPLNGGSGAS 199
            ...:....|..       |......|||.....|..|:..    :||.||
Zfish   100 QASTPSPFPAQ-------TEQCPAVQISGSRTGGQQQNTKTQNGIPTKQP--------------- 142

  Fly   200 NGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGM 264
             .|:||          .|...:::..:..|...:|
Zfish   143 -AVVYP----------WMKKVHVTTVNPDYTGPEP------------------------------ 166

  Fly   265 GVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKH 329
                      :::||.::..|:..|||.|...|||:...|:|:|..|.|||.|:|.||||||||.
Zfish   167 ----------KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKW 221

  Fly   330 KK 331
            ||
Zfish   222 KK 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	27/55 (49%)
hoxd4a	NP_001119917.1	Homeodomain	167..223	CDD:459649	27/55 (49%)