DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Meox2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_058845.2 Gene:Meox2 / 29279 RGDID:3079 Length:303 Species:Rattus norvegicus


Alignment Length:363 Identity:101/363 - (27%)
Similarity:132/363 - (36%) Gaps:117/363 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NPHK-----HP-SQHS--------HPPQSHPPASASASATATARSNQAASGYAGED--YGKSMHS 145
            :||.     || ||.|        |  .|:|..|.|:|:...|       ||..|:  :....| 
  Rat    11 SPHATAQGLHPFSQSSLALHGRSDH--MSYPELSTSSSSCIIA-------GYPNEEGMFASQHH- 65

  Fly   146 TPRSNHHSRHGTSHYNGDQISQQLGS-----------GAAQHPPVPTTQPQPPPPPPLNGGSGAS 199
              |.:||..|...|::..|..|.|.|           .||:|.  ...||....||.|    |:|
  Rat    66 --RGHHHHHHHHHHHHQQQQHQALQSNWHLPQMSSPPSAARHS--LCLQPDSGGPPEL----GSS 122

  Fly   200 NGVLYPN--------------APYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFG 250
            ..||..|              || .|:|...::...:...||:.:..|    |..|..|      
  Rat   123 PPVLCSNSSSLGSSTPTGAACAP-GDYGRQALSPAEVEKRSGSKRKSD----SSDSQEG------ 176

  Fly   251 APGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSE 315
                      .....||:    :.||.||.|:..|:..||..|....||:...|.|:|..|.|:|
  Rat   177 ----------NYKSEVNS----KPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 227

  Fly   316 TQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSG--DSKHGKLNPGSVGGTP 378
            .|||.||||||||.|:                 ..|.|.|.|.....  :.|.|.|.|..:.|  
  Rat   228 RQVKVWFQNRRMKWKR-----------------VKGGQQGAAAREKELVNVKKGTLLPSELSG-- 273

  Fly   379 TQPTSEQQLQMCLMQQGYSTDDYSDLEADSGDEDNSSD 416
                    :....:||   |.| |....||.|.|:||:
  Rat   274 --------IGAATLQQ---TGD-SLANDDSRDSDHSSE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/55 (51%)
Meox2NP_058845.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 37/161 (23%)
Homeodomain 187..243 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..303 11/25 (44%)

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