DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Tlx3

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_036012630.1 Gene:Tlx3 / 27140 MGIID:1351209 Length:338 Species:Mus musculus


Alignment Length:308 Identity:82/308 - (26%)
Similarity:109/308 - (35%) Gaps:111/308 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 APKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGK 141
            ||...||...:|        :| ..|:|...||:...||||                        
Mouse    23 APWPRRNGDPAA--------SP-PSPAQPFRPPRMEAPASA------------------------ 54

  Fly   142 SMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPP-----LNGGSGASNG 201
               .||..:.....|        |.|.|.|        |.....|.|..|     |.|..|...|
Mouse    55 ---QTPHPHEPISFG--------IDQILNS--------PDQDSAPAPRGPDGASYLGGPPGGRPG 100

  Fly   202 VLYPN---------APYTDHGFLQMTLGYLSPSSGTYK---------SVDPYFLS---------Q 239
            ..||:         ||:.|.|...:.|. |:| :|..:         :|.|...|         .
Mouse   101 AAYPSLPASFAGLGAPFEDAGSYSVNLS-LAP-AGVIRVPAHRPLPGAVPPPLPSALPAMPSVPT 163

  Fly   240 ASLFGGAPF-------------FGAPGCVPELALGLGMGVNALRH-------CRRRKARTVFSDP 284
            .|..||..|             |.|...:....:...:|     |       .:|:|.||.||..
Mouse   164 VSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIG-----HPYQNRTPPKRKKPRTSFSRV 223

  Fly   285 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQ 332
            |:..|||||..|:||::.||..||.:|.:::.||||||||||.|.::|
Mouse   224 QICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQ 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
Tlx3XP_036012630.1 PRK07764 <20..>109 CDD:236090 31/137 (23%)
Homeodomain 214..270 CDD:459649 30/55 (55%)

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