DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and tlx3b

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_739572.2 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:339 Identity:93/339 - (27%)
Similarity:128/339 - (37%) Gaps:76/339 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DNNPHKHP---SQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHG 156
            |..|...|   ||.|.|.| |.|.|...        :|..||...|    |..::.|::..|..|
Zfish     2 DRAPSSSPSGTSQTSQPTQ-HEPISFGI--------DQILSGTDQE----SQQNSTRNSSESSSG 53

  Fly   157 TSHYNGDQISQQLGS--GAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTL 219
            :|..:|.  ...|||  ||:..|....|              |..:|:.   |||.:.....|.|
Zfish    54 SSSASGG--CYHLGSPTGASATPYTTLT--------------GTFHGIA---APYEESSPYGMNL 99

  Fly   220 GYLSPSSGTYK---------SVDPYFLSQASLFGGAPF-------------FGAPGCVPELALGL 262
             .|:| .|..:         :|.|...|.....|...|             |.|......:|..:
Zfish   100 -TLAP-GGVIRVPAHRPLAAAVPPPMASAVPGLGSLSFPWMESSQRFAKDRFAAALTPFTVARRI 162

  Fly   263 GMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRM 327
            |.........:|:|.||.||..|:..|||||..|:||::.||..||..|.:::.||||||||||.
Zfish   163 GHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRT 227

  Fly   328 KHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLM 392
            |.     ||..|.|      .|..:|  :|.......:|...........||.|.......:..:
Zfish   228 KW-----RRQTAEE------REAERQ--QANRLMIQLQHDAFQKSLTDSVPTDPLCIHNSSLFAL 279

  Fly   393 Q--QGYSTDDYSDL 404
            |  |.:::::.|.|
Zfish   280 QNLQPWASEESSKL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
tlx3bNP_739572.2 Homeodomain 175..231 CDD:459649 30/60 (50%)

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