DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Dlx5

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_037075.1 Gene:Dlx5 / 25431 RGDID:2506 Length:289 Species:Rattus norvegicus


Alignment Length:229 Identity:73/229 - (31%)
Similarity:103/229 - (44%) Gaps:51/229 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DQISQQLGSGAAQHP-PVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSS 226
            |:....:.||..|.| |.......|....|....|.|::...|..|....|       ||.||:|
  Rat     6 DRRVPSIRSGDFQAPFPTSAAMHHPSQESPTLPESSATDSDYYSPAGAAPH-------GYCSPTS 63

  Fly   227 GTY-KSVDPYFLSQASLFGGA---------------PFF---GAPGCVP--------ELALGLGM 264
            .:| |:::||.....|:.|.|               |:.   ||...||        |:|.....
  Rat    64 ASYRKALNPYQYQYHSVNGSAAGYPAKAYADYGYASPYHQYGGAYNRVPSATSQPEKEVAEPEVR 128

  Fly   265 GVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKH 329
            .||. :..:.||.||::|..||:.|::||:..:||:.|||.|||.:|||::||||.||||:|.|.
  Rat   129 MVNG-KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKI 192

  Fly   330 KKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGD 363
            ||.::.               |:.|.|.:.||.|
  Rat   193 KKIMKN---------------GEMPPEHSPSSSD 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
Dlx5NP_037075.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 10/42 (24%)
DLL_N 32..118 CDD:463567 23/92 (25%)
Homeodomain 138..194 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..253 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..289
Blue background indicates that the domain is not in the aligned region.

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