DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Obox5

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_663755.2 Gene:Obox5 / 252829 MGIID:2149035 Length:291 Species:Mus musculus


Alignment Length:281 Identity:62/281 - (22%)
Similarity:99/281 - (35%) Gaps:78/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 LGSGAAQHPPVPTTQ----------PQPP---------PPPPLNGGSGASNGVLYPNAPYTDHGF 214
            :..|.:.||.:....          ||.|         ..|.:..||...:.:..|     :...
Mouse     1 MAEGPSLHPKLQVASNIPIEIRSQIPQEPARNLAFQMSQSPLVTPGSTMQSSLSVP-----ERNL 60

  Fly   215 LQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKART 279
            ||......|..||:....|.|...|........|                          ||.||
Mouse    61 LQQESEGSSRQSGSMPLSDKYVNKQTGPMASRKF--------------------------RKERT 99

  Fly   280 VFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKH--------KKQLRRR 336
            |::..|...|:|.|:..:|.:..:.:|||.::|:::.::|.||:|.|.|:        |:.|...
Mouse   100 VYTKEQQRLLQKHFDECQYPNEKKIMELAVSVGVTKMEIKIWFKNNRAKYRRMNLQNIKQALPES 164

  Fly   337 DNANEPVDFSRSEPGKQP------GEATSSS--GDSKHGKLNPGSVGGTPTQPTSEQQLQMC--- 390
            :..::.|..|...||..|      ||:..|.  |:....|.|       .:|.:|....|.|   
Mouse   165 NGISKAVSESTHFPGSIPVVASDNGESMCSGTFGEDSMPKFN-------CSQESSLYCFQACDGD 222

  Fly   391 -LMQQGYSTDDYSDLEA-DSG 409
             ...|.|..|.::.:.| :||
Mouse   223 MCCPQEYLLDGHAPVTAWNSG 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 20/63 (32%)
Obox5NP_663755.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..97 14/86 (16%)
Homeodomain 95..151 CDD:459649 20/55 (36%)

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