Protein Alignment bsh and Gbx1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 321
• Identity: 88/321 - (27%)
• Similarity: 125/321 - (38%)
• Gaps: 98/321 - (30%)

  Fly    66 TNGIAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSH--PPASASASATATARSN 128
            :|...|......|  |..|:.:|..:||             .||.::  ||..|:|:|.|.|
  Rat   143 SNTFCAGLGQAVP--SMVALTTALPSFA-------------EPPDAYYGPPELAAAAAAAAA--- 189

  Fly   129 QAASGYAGEDYGKSMHSTPRSNHH--SRHGTSHYNGDQISQQLGSGAAQHPPVP----TTQPQPP 187
                           .:..|||..  :|......:.|::             :|    .|:|.||
  Rat   190 ---------------STVSRSNPEPPARRTDGALDADEL-------------LPAREKVTEPPPP 226

  Fly   188 PPPPLNGGSGASNGVLYPNAP------YTDHGFLQMTLGYLSPS----SGTYKSVDPYFLSQASL 242
            ||||....|..     :|:.|      .:|...|:...|..:.|    .|:....:..||..::
  Rat   227 PPPPPPHFSET-----FPSLPAEGKVYSSDEEKLEPPAGEPAGSEPEEEGSGGDSEDSFLDSSA- 285

  Fly   243 FGGAPFFGAPGCV----PELALGLGMGVN---------ALRHCRRRKARTVFSDPQLSGLEKRFE 294
                   |.||.:    |:|...||.|..         .....:.|:.||.|:..||..|||.|.
  Rat   286 -------GGPGALLGPKPKLKGSLGTGAEEGTPVATGVTTPGGKSRRRRTAFTSEQLLELEKEFH 343

  Fly   295 GQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRS-EPGKQP 354
            .::|||..||.::|.||.|||.|||.||||||.|.|:  .:..|.:     ||| ||.:.|
  Rat   344 CKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR--IKAGNVS-----SRSGEPVRNP 397

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)
Gbx1	NP_001258382.1	Homeodomain	324..380	CDD:459649	31/55 (56%)