DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Tlx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_006526978.1 Gene:Tlx1 / 21908 MGIID:98769 Length:345 Species:Mus musculus


Alignment Length:180 Identity:58/180 - (32%)
Similarity:81/180 - (45%) Gaps:46/180 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 SGAAQHP-PVPTTQPQPPPPPPLNGGSGASNGVLYP----NAPYTDHGFLQMTLGYLSPSSGTYK 230
            :||..|| |:.|..|..|..|.:.|.:..: |:.:|    |..||...|   |:. |||.:.|.:
Mouse   144 AGAVAHPQPLATGLPTVPSVPAVPGVNNLT-GLTFPWMESNRRYTKDRF---TVA-LSPFTVTRR 203

  Fly   231 SVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEG 295
            ...||                ....|.               :::|.||.|:..|:..|||||..
Mouse   204 IGHPY----------------QNRTPP---------------KKKKPRTSFTRLQICELEKRFHR 237

  Fly   296 QRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQL-----RRRDNAN 340
            |:||::.||..||.||.:::.||||||||||.|.::|.     ..|..||
Mouse   238 QKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQAN 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
Tlx1XP_006526978.1 Homeodomain 217..273 CDD:459649 30/55 (55%)

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