DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and tab-1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:220 Identity:81/220 - (36%)
Similarity:99/220 - (45%) Gaps:68/220 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 TARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPP 188
            |:.:.|::|....|....|:.|.|.:|..:...|     ..:|.||...||..|           
 Worm    30 TSPTPQSSSDEGSEKSSISVMSVPLTNELTPTIT-----PALSDQLWLAAAAFP----------- 78

  Fly   189 PPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPG 253
                                 .:|..|      |:..:|.:    |.|.|.|.            
 Worm    79 ---------------------IEHSLL------LAQRNGVF----PGFWSTAD------------ 100

  Fly   254 CVPELALGLGMGVNALR----HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLS 314
                 .:.|.....|.|    .|.||||||||||.||.|||:|||.|||||||||:|||.||.||
 Worm   101 -----QIRLSNATKAYRRLRLECSRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLS 160

  Fly   315 ETQVKTWFQNRRMKHKKQLRRRDNA 339
            |||||||||||||||||.:|:.||:
 Worm   161 ETQVKTWFQNRRMKHKKVVRKDDNS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 48/55 (87%)
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 48/55 (87%)

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