DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Nkx3-1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_035051.1 Gene:Nkx3-1 / 18095 MGIID:97352 Length:237 Species:Mus musculus


Alignment Length:231 Identity:62/231 - (26%)
Similarity:82/231 - (35%) Gaps:75/231 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 RSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVP--TTQPQP---------PPPPPLNGGSGASNG 201
            |:..|..|               ||..||.|.|  .:.|:|         |..||....|.|.. 
Mouse    42 RAERHGGH---------------SGNPQHSPDPRRDSAPEPDKAGGRGVAPEDPPSIRHSPAET- 90

  Fly   202 VLYPNAPYTDHGFLQMTLGYLSPSSGTYK---SVDPYFLSQASLFGGAPFFGAPGCVPELALGLG 263
               |..|.:|..|            .||.   ..:|..|:.|......|                
Mouse    91 ---PTEPESDAHF------------ETYLLDCEHNPGDLASAPQVTKQP---------------- 124

  Fly   264 MGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMK 328
                      ::::|..||..|:..||::|..|:|||.|||..||..|.|:|||||.||||||.|
Mouse   125 ----------QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYK 179

  Fly   329 HKKQLRRRD----NANEPVDFSRSEPGKQPGEATSS 360
            .|::....|    ..|.|:.....:....|..:..|
Mouse   180 TKRKQLSEDLGVLEKNSPLSLPALKDDSLPSTSLVS 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
Nkx3-1NP_035051.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 18/72 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..130 4/47 (9%)
Homeodomain 126..182 CDD:459649 30/55 (55%)

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