DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Nkx2-3

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_032725.1 Gene:Nkx2-3 / 18089 MGIID:97348 Length:362 Species:Mus musculus


Alignment Length:188 Identity:60/188 - (31%)
Similarity:77/188 - (40%) Gaps:60/188 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 RRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDN 338
            |||.|.:||..|:..||:||:.|||||.|||..||::|.|:.||||.||||||.|.|:|  |:|.
Mouse   145 RRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQ--RQDK 207

  Fly   339 ANE---------------PVDFSRSEPGKQPGEATSSS-------------------GDS----- 364
            :.|               ||.....:|...|...|..|                   |:|     
Mouse   208 SLELGTHAPPPPPRRVAVPVLVRDGKPCVTPSAQTYGSPYGVGAGAYSYNSFPAYGYGNSAAAAA 272

  Fly   365 --------------KHGKLNP----GSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDL 404
                          .:|...|    |..|||.:..|:..| ..|....|.|..:.|:|
Mouse   273 AAAAAAAAAAAYSGSYGCAYPTGGGGGGGGTASAATTAMQ-PACSATGGGSFVNVSNL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 33/55 (60%)
Nkx2-3NP_032725.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..149 3/3 (100%)
Homeodomain 146..202 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..222 4/20 (20%)

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