Protein Alignment bsh and cog-1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001022264.1
• Gene: cog-1 / 175149
• WormBaseID: WBGene00000584
• Length: 256
• Species: Caenorhabditis elegans
• Alignment Length: 361
• Identity: 77/361 - (21%)
• Similarity: 132/361 - (36%)
• Gaps: 132/361 - (36%)

  Fly    21 TTPTHSKAAAMASATTMLTTKTPFSIEHILFQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAV 85
            |||..........::|       :||.::|.:...|:.:.::|.|.:..:.:.:..:|
 Worm    12 TTPDDKDVENRKHSST-------YSISNLLLEKKESSPSGSSSEDDSASSNDDDQRSP------- 62

  Fly    86 KSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSN 150
             ||.|:|.                  .||||:|:|:.:.....|.
 Worm    63 -SATSSFI------------------FPPASSSSSSESATSPTQI-------------------- 88

  Fly   151 HHSRHGTSHYNGDQISQQLGSGAAQHPPVPT----TQPQPPPPPPLNGGSGASNGVLYPNAPYTD 211
                          ::|.:.:|.|..|.:..    .|.|      ||..| ..|.|...|....
 Worm    89 --------------MAQLMANGGAVDPGLQAYFFLLQSQ------LNSQS-MMNRVTQENVSRA- 131

  Fly   212 HGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELA-LG-----LGMGVNALR 270
                                     |:..:|..     ..||.:|.|: :|     :.:..|:|
 Worm   132 -------------------------LTSFNLLN-----NLPGALPSLSPMGRLQHSMQLSPNSL- 165

  Fly   271 HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRR 335
            :.:::::|..|:..|:..||::||..:||:..:|.:||..|.:||:|||.||||||.|.:|:
 Worm   166 NMQKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKK--- 227

  Fly   336 RDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNP 371
                 |..|.:..:.|        :|||.....|:|
 Worm   228 -----EAADNALVKRG--------ASGDKSPCSLSP 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	25/55 (45%)
cog-1	NP_001022264.1	Homeodomain	170..226	CDD:459649	25/55 (45%)