DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Meox1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_036012267.1 Gene:Meox1 / 17285 MGIID:103220 Length:271 Species:Mus musculus


Alignment Length:258 Identity:56/258 - (21%)
Similarity:78/258 - (30%) Gaps:94/258 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PQPPPP------PPLNGGSGASNGVLYPNAPYTDH---------GFLQMTLGYLSPSSGTYKSVD 233
            ||||.|      .|.:..|.||....||..|::.|         .:...:...|:.:..:....:
Mouse    12 PQPPAPVWGCLRNPHSEDSSASGLSHYPPTPFSFHQKSDFPATAAYPDFSASCLAATPHSLPRTE 76

  Fly   234 PYFLSQASLFGGAPFF------------------------GAPGCVPELALGLGMGVNAL----- 269
            ..|..|...|...|.:                        |:||.|...| |||.....|     
Mouse    77 RIFNEQHPAFPQTPDWHFPISEAGQRLNLGPAGSAREMGAGSPGLVDGTA-GLGEDCMVLGTIAN 140

  Fly   270 ----RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKT------W--- 321
                :..||:|.|:               ||..:..||. |:.|..|.|.. |.|      |   
Mouse   141 ETEKKSSRRKKERS---------------GQSLVPEPED-EVETCEGGSAC-VPTGAGPRGWGLC 188

  Fly   322 ----FQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKH----------GKLN 370
                |:.|..|.:.|.|.::   .|:.|  ..||.......:..|...|          |.||
Mouse   189 SFSKFRVRCSKDQNQERLKE---PPLQF--PPPGPTLSHLWTHPGQPAHTLRCEVAQYVGALN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 16/68 (24%)
Meox1XP_036012267.1 None

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