DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and NKX6-3

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001351770.1 Gene:NKX6-3 / 157848 HGNCID:26328 Length:265 Species:Homo sapiens


Alignment Length:261 Identity:72/261 - (27%)
Similarity:111/261 - (42%) Gaps:39/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GTSHYNGDQISQ--QLGSGAAQHPPVPTTQPQPPP--PPPLNGGS------------GASNGVLY 204
            ||...|...::|  ::.:...|:....:.....||  .|.|..|:            .|.|..|.
Human     7 GTFLLNNTPLAQFPEMKAPVCQYSVQNSFYKLSPPGLGPQLAAGTPHGITDILSRPVAAPNNSLL 71

  Fly   205 PNAPY-TDHGFLQMTLGYLSPSSGTY-KSVDPYFLSQASLFG--GAPFFGAPGC--VPELALGLG 263
            ...|: ...|.|.....|.||..|.: |:.:.|.....:.:.  |..:.|...|  .|:   .|.
Human    72 SGYPHVAGFGGLSSQGVYYSPQVGNFSKAGNEYPTRTRNCWADTGQDWRGGRQCSNTPD---PLS 133

  Fly   264 MGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMK 328
            ..::..:|     .|..|:..|:..|||.||..:||:.|||..||.:||::|:|||.||||||.|
Human   134 DSIHKKKH-----TRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 193

  Fly   329 HKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQ 393
            .:|:     :|.||   |.|.| :.||.|.:.:|..:....|.......|..|.|:.:....|::
Human   194 WRKK-----SALEP---SSSTP-RAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDEKIRLLLR 249

  Fly   394 Q 394
            :
Human   250 K 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/55 (51%)
NKX6-3NP_001351770.1 Homeodomain 138..196 CDD:459649 29/62 (47%)

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