Protein Alignment bsh and Hoxc4

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_038581.2
• Gene: Hoxc4 / 15423
• MGIID: 96195
• Length: 264
• Species: Mus musculus
• Alignment Length: 329
• Identity: 84/329 - (25%)
• Similarity: 114/329 - (34%)
• Gaps: 114/329 - (34%)

  Fly    74 NNYAPKSSRNAV-KSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGE 137
            |:|.|:.|.... ::..|.|.|.:       |..:||   ||...|               |...
Mouse    26 NSYIPEHSPEYYGRTRESGFQHHH-------QELYPP---PPPRPS---------------YPER 65

  Fly   138 DYG-KSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNG 201
            .|. .|:.....|..|......|::.:: ||.|    .:..|:..|...|.|.||.
Mouse    66 QYSCTSLQGPGNSRAHGPAQAGHHHPEK-SQPL----CEPAPLSGTSASPSPAPPA--------- 116

  Fly   202 VLYPNAPYTDHGFLQMTLGYLSPSSGTYK--------------SVDPYFLSQASLFGGAPFFGAP 252
               .:.|..||           |||...|              :|:|.:      .||.|
Mouse   117 ---CSQPAPDH-----------PSSAASKQPIVYPWMKKIHVSTVNPNY------NGGEP----- 156

  Fly   253 GCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQ 317
                                  :::||.::..|:..|||.|...|||:...|:|:|.:|.|||.|
Mouse   157 ----------------------KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199

  Fly   318 VKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPT 382
            :|.||||||||.||..|.      |....||.|  ..|.|.|:...:..|.....|...||
Mouse   200 IKIWFQNRRMKWKKDHRL------PNTKVRSAP--PAGAAPSTLSAATPGTSEDHSQSATP---- 252

  Fly   383 SEQQ 386
            .|||
Mouse   253 PEQQ 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	27/55 (49%)
Hoxc4	NP_038581.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..130		34/156 (22%)
		Antp-type hexapeptide	135..140		0/4 (0%)
		Homeodomain	157..213	CDD:459649	27/55 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	214..264		15/55 (27%)