DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Hoxb8

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_034591.1 Gene:Hoxb8 / 15416 MGIID:96189 Length:243 Species:Mus musculus


Alignment Length:248 Identity:72/248 - (29%)
Similarity:95/248 - (38%) Gaps:82/248 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SQQLG-----------SGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTD-------H 212
            :|.||           .|:.|||    :|.|    ...:|.|..|      .|||..       |
Mouse    29 AQDLGGRPTVVYGPSSGGSFQHP----SQIQ----EFYHGPSSLS------TAPYQQNPCAVACH 79

  Fly   213 GFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVP----ELALGLGMGVNA----- 268
            |           ..|.:...||  |.:.||||...    |..|.    :||...|:|..|     
Mouse    80 G-----------DPGNFYGYDP--LQRQSLFGAQD----PDLVQYADCKLAAASGLGEEAEGSEQ 127

  Fly   269 ----------LR---HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKT 320
                      :|   ...||:.|..:|..|...|||.|....||:...|:|::.||||:|.|||.
Mouse   128 SPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKI 192

  Fly   321 WFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGE------ATSSSGDSKHG 367
            ||||||||.||     :|..:....|:.|..:...|      .|:..||::.|
Mouse   193 WFQNRRMKWKK-----ENNKDKFPSSKCEQEELEKEKLERAPETAEQGDAQKG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/55 (51%)
Hoxb8NP_034591.1 Antp-type hexapeptide 134..139 0/4 (0%)
Homeodomain 147..203 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 9/43 (21%)

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