DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Hoxb5

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:276 Identity:72/276 - (26%)
Similarity:99/276 - (35%) Gaps:79/276 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 GEDY-------GKSM---HSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQH----------PPVP 180
            |.||       |.|:   :..|.:.|...:| .:|||..:|....|.::.|          .|..
Mouse    16 GPDYQLLNYGSGSSLSGSYRDPAAMHTGSYG-YNYNGMDLSVNRSSASSSHFGAVGESSRAFPAS 79

  Fly   181 TTQPQ------------PPPPPPLNGGS-GASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSV 232
            ..:|:            |...|..||.| ||......|:...|.           :.||..:..:
Mouse    80 AQEPRFRQATSSCSLSSPESLPCTNGDSHGAKPSASSPSDQATP-----------ASSSANFTEI 133

  Fly   233 DPYF-----------LSQASLFGGAPF-FGAPGCVPELALGLGMGVNALRHCRR----------- 274
            |...           ||..||....|. .......||     |.........|:           
Mouse   134 DEASASSEPEEAASQLSSPSLARAQPEPMATSTAAPE-----GQTPQIFPWMRKLHISHDMTGPD 193

  Fly   275 -RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDN 338
             ::|||.::..|...|||.|...|||:...|:|:|.||.|||.|:|.||||||||.||     ||
Mouse   194 GKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK-----DN 253

  Fly   339 ANEPVDFSRSEPGKQP 354
            ..:.:..:.:....||
Mouse   254 KLKSMSLATAGSAFQP 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 29/55 (53%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 21/119 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 22/113 (19%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 195..251 CDD:459649 29/55 (53%)

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