Protein Alignment bsh and Hoxb1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Alignment Length: 339
• Identity: 99/339 - (29%)
• Similarity: 128/339 - (37%)
• Gaps: 89/339 - (26%)

  Fly    99 HKHPSQHSHPPQSHPPASASASATATARSN----------QAASGYAGE----DYGKSMHSTPRS 149
            ::.||.:| .|.|.||.||.|..:....|.          |..|||..:    ..|.|..|...|
Mouse    16 NRGPSAYS-APTSFPPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPAPS 79

  Fly   150 NH-----HSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQ----------------PQPPPPPPLN 193
            .:     :..:|.|.|.  .:.|..|.|:..||.....|                |.|||.||..
Mouse    80 GYAPAACNPSYGPSQYY--SVGQSEGDGSYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYG 142

  Fly   194 GGSGASNGVLY------PNAP-------YTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGG 245
            ....|:....|      ..:|       .|...|..|.:....|.:|  ::...:|||.|..:..
Mouse   143 TEQTATFASAYDLLSEDKESPCSSEPSTLTPRTFDWMKVKRNPPKTG--RAQRSHFLSLARAYTE 205

  Fly   246 APFFGAPGC------------VPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRY 298
            .|   .||.            |.||.||...|:           ||.|:..||:.|||.|...:|
Mouse   206 GP---EPGLHSFLQLLLLAAKVSELGLGAPGGL-----------RTNFTTRQLTELEKEFHFNKY 256

  Fly   299 LSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGD 363
            ||...|||:|..|.|:|||||.||||||||.||  |.|:....|.    ..|| .|.||...:.|
Mouse   257 LSRARRVEIAATLELNETQVKIWFQNRRMKQKK--REREGGRMPA----GPPG-CPKEAAGDASD 314

  Fly   364 SK---HGKLNPGSV 374
            ..   ..:.:|.|:
Mouse   315 QSACTSPEASPSSI 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	31/52 (60%)