DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Hoxa6

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:34 Identity:14/34 - (41%)
Similarity:16/34 - (47%) Gaps:6/34 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LHSSGDEE-----PNHELYSAAVHKLVVLMNAGV 36
            |.|.||||     |..|:.|.. |:|..|.|..|
Mouse   637 LSSVGDEEVTATAPKEEVKSEE-HELKDLKNNAV 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126
Antp-type hexapeptide 135..140
Homeodomain 155..211 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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