Protein Alignment bsh and Hoxa4

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_032291.1
• Gene: Hoxa4 / 15401
• MGIID: 96176
• Length: 285
• Species: Mus musculus
• Alignment Length: 301
• Identity: 79/301 - (26%)
• Similarity: 107/301 - (35%)
• Gaps: 74/301 - (24%)

  Fly    99 HKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGD 163
            :..|....|.|..:|.|:....|....|:.:.:  |.|..|.....:.|    ::..|.|....:
Mouse    42 YPRPQSAPHLPAPNPHAARQPPAYYAPRAREPS--YPGGLYPAPAAACP----YACRGASPARPE 100

  Fly   164 QISQQLGSGAAQHPPVPTTQPQP---PPPPPLNGGSGASNGVLYPNAPYTDHG-------FLQMT 218
            |            .|.|...|.|   ||.||.:...|       |..|....|       .|...
Mouse   101 Q------------SPAPGAHPSPAPQPPAPPRHCAPG-------PTTPAVATGGSAPACPLLLAD 146

  Fly   219 LGYLSPSSGTYKSVDPYFLS------QASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKA 277
            .|...| .|....|.|:...      .:|..||.|                           :::
Mouse   147 QGPAGP-KGKEPVVYPWMKKIHVSAVNSSYNGGEP---------------------------KRS 183

  Fly   278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEP 342
            ||.::..|:..|||.|...|||:...|:|:|..|.|||.|||.||||||||.||. .:..|....
Mouse   184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD-HKLPNTKMR 247

  Fly   343 VDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTS 383
            ...:.|.|...||:|.:   .|.|...:|.....||. |:|
Mouse   248 SSNTASAPAGPPGKAQT---HSPHPHPHPLPGASTPI-PSS 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	28/55 (51%)
Hoxa4	NP_032291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..70		6/27 (22%)
		PHA03247	<43..161	CDD:223021	31/143 (22%)
		Antp-type hexapeptide	159..164		2/4 (50%)
		Homeodomain	181..237	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..285		13/52 (25%)