DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Hmx2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_666110.1 Gene:Hmx2 / 15372 MGIID:107159 Length:273 Species:Mus musculus


Alignment Length:160 Identity:59/160 - (36%)
Similarity:77/160 - (48%) Gaps:27/160 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PPVPTTQPQPPPPPPLNG---GSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLS 238
            |..|:.:...|.|.|..|   |||.:........|            :||||...:|..     .
Mouse    73 PKEPSPKHHTPIPFPCLGTPKGSGGAGPAASERTP------------FLSPSHPDFKEE-----K 120

  Fly   239 QASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPE 303
            :..|..|:|   :||  ||..  ...|........::|.|||||..|:..||..|:.:||||:.|
Mouse   121 ERLLPAGSP---SPG--PERP--RDGGAERQTGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSE 178

  Fly   304 RVELATALGLSETQVKTWFQNRRMKHKKQL 333
            |..||::|.|:||||||||||||.|.|:||
Mouse   179 RACLASSLQLTETQVKTWFQNRRNKWKRQL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 33/55 (60%)
Hmx2NP_666110.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..154 24/104 (23%)
Homeodomain 150..206 CDD:459649 33/55 (60%)

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