DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Gsx2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus


Alignment Length:282 Identity:85/282 - (30%)
Similarity:106/282 - (37%) Gaps:67/282 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SHPPQSHPPASASASATATARSNQAASGYAGEDYG----KSMHS--------TPRSN--HHSRHG 156
            ||...|.|||.|...||.||.:..|..|.||....    ||..|        .||.:  ||..|.
Mouse    67 SHLHSSRPPAGAGGGATGTAGAAVAGGGVAGGTGALPLLKSQFSPAPGDAQFCPRVSHAHHHHHP 131

  Fly   157 TSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGY 221
            ..|::.....||.||.||........           ..:.|:.|....:||..           
Mouse   132 PQHHHHHHQPQQPGSAAAAAAAAAAA-----------AAAAAALGHPQHHAPVC----------- 174

  Fly   222 LSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQL 286
               ::.||...||......|: ||:.....|                    ..::.||.|:..||
Mouse   175 ---AATTYNMSDPRRFHCLSM-GGSDTSQVP--------------------NGKRMRTAFTSTQL 215

  Fly   287 SGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPG 351
            ..||:.|....|||...|:|:||.|.|||.|||.||||||:||||:.:.....|..   |....|
Mouse   216 LELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGASRNNHT---SCKCVG 277

  Fly   352 KQPGEATSSSGDSKHGKLNPGS 373
            .|...|.|...||    |:|.|
Mouse   278 SQAHYARSEDEDS----LSPAS 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 12/35 (34%)
Homeodomain 204..260 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 13/44 (30%)

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