DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Gbx2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:284 Identity:67/284 - (23%)
Similarity:85/284 - (29%) Gaps:117/284 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PPVPTTQPQPPPPPPLNGGSGASNGVLYPNAP--YTDHGFLQMTLGYLS---------------- 223
            |..|...|.||||||     ......|.|..|  :..|....:..|:.|                
Mouse    49 PYRPVVLPPPPPPPP-----ALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATL 108

  Fly   224 ------------------------PSSGTYKSVDPY---------FLS--------------QAS 241
                                    |..|.:...:..         ||:              |||
Mouse   109 PGGFSASPQHQEAAAARKFAPQPLPGGGNFDKAEALQADAEDGKAFLAKEGSLLAFSAAEAVQAS 173

  Fly   242 LFGGAPFFGA----------------------------------------PG-CVPELALGLGMG 265
            |.|.....|.                                        || .:.|.....|..
Mouse   174 LVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAA 238

  Fly   266 VNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330
            .:.....:.|:.||.|:..||..|||.|..::|||..||.::|.||.|||.|||.||||||.|.|
Mouse   239 GSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303

  Fly   331 KQLRRRDNANEPVDFSRSEPGKQP 354
            :.  :..|||.    ...||.:.|
Mouse   304 RV--KAGNANS----KTGEPSRNP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 2/27 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 6/71 (8%)
Homeodomain 248..304 CDD:459649 31/55 (56%)

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