DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Dmbx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_017175446.1 Gene:Dmbx1 / 140477 MGIID:2153518 Length:389 Species:Mus musculus


Alignment Length:169 Identity:49/169 - (28%)
Similarity:75/169 - (44%) Gaps:28/169 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLR 334
            :|.::|::||.|:..||..|||.|:...|.....|..||....|.|.:|:.||:|||.|.:|:.|
Mouse    75 QHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 139

  Fly   335 RRDNANEPVDFSRSEPGKQPGEATSSSGDSK----------HGKLNPGSVGGTPTQPTSEQQLQM 389
                     ...:.:..||. ||..|.|:.|          ..:..||...|.|     ..:||:
Mouse   140 ---------SLQKEQLQKQK-EAEGSHGEGKVEAPASDTQLETEQPPGLPSGDP-----PAELQL 189

  Fly   390 CLMQQGYS---TDDYSDLEADSGDEDNSSDVDIVGDAKL 425
            .|.:|..|   .:|..|.|.||..|:..::.....::|:
Mouse   190 SLSEQSASESAPEDQLDREEDSRAEEPKAEKSPGSESKV 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 23/55 (42%)
Dmbx1XP_017175446.1 Homeodomain 80..136 CDD:459649 23/55 (42%)

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