DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Dbx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:386 Identity:107/386 - (27%)
Similarity:149/386 - (38%) Gaps:92/386 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GIAANTNNY----APKSSRNAVKSARSAFA-HDNNPHKHPSQHSHPP----QSHPPASASASATA 123
            |:.|....|    .|..:....:|.:|||: |.:...:...:.|.||    :|.|.||.|..   
Mouse     5 GLLAPPAGYPSLLRPTPTLTLPQSLQSAFSGHSSFLVEDLIRISRPPTYLSRSIPAASLSPP--- 66

  Fly   124 TARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPP 188
               |.:|.:..|  |.|.|...:|.|.  ||.|:|                     |.|...|..
Mouse    67 ---SQEAPAALA--DSGTSDLGSPGSG--SRRGSS---------------------PQTALSPAS 103

  Fly   189 PPP-LNGGSGASNGVLYPNAP--YTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFG 250
            .|. |..|..|    :..:||  .|....||      ||...|:  ..|||......|..:.:|.
Mouse   104 EPTFLKFGVNA----ILSSAPRRETSPALLQ------SPPPKTF--AFPYFEGSFQPFIRSSYFP 156

  Fly   251 APGCVPELALGLGMGVNALRHCRR-RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLS 314
            |...|..:.......:.|....|| ...|.||||.|...|||.|:.|:|:|.|:|.:||:.|||.
Mouse   157 ASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLK 221

  Fly   315 ETQVKTWFQNRRMK----HKKQLRRRDNANEPV------------DFSRSEPGKQ----PGE--A 357
            ::|||.||||||||    .:::|.......|..            |..:..||.:    ||.  |
Mouse   222 DSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGDEEEDNPGARLA 286

  Fly   358 TSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDLEAD-SGDEDNSSDV 417
            ..:..|.:|  |..|.:..:|...:|..:           ..|:||.:.| .|:||....|
Mouse   287 YHAPADPRH--LLEGPLPASPAHSSSPGK-----------PSDFSDSDEDEEGEEDEEITV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/59 (53%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 44/175 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102 18/74 (24%)
Homeodomain 184..238 CDD:459649 31/53 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 22/108 (20%)

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