Protein Alignment bsh and Gbx2

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_446160.1
• Gene: Gbx2 / 114500
• RGDID: 621866
• Length: 348
• Species: Rattus norvegicus
• Alignment Length: 284
• Identity: 67/284 - (23%)
• Similarity: 85/284 - (29%)
• Gaps: 117/284 - (41%)

  Fly   177 PPVPTTQPQPPPPPPLNGGSGASNGVLYPNAP--YTDHGFLQMTLGYLS---------------- 223
            |..|...|.||||||     ......|.|..|  :..|....:..|:.|
  Rat    49 PYRPVVLPPPPPPPP-----ALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATL 108

  Fly   224 ------------------------PSSGTYKSVDPY---------FLS--------------QAS 241
                                    |..|.:...:..         ||:              |||
  Rat   109 PGGFSASPQHQEAAAARKFAPQPLPGGGNFDKSEALQADTEDGKAFLAKEGSLLAFSAAEAVQAS 173

  Fly   242 LFGGAPFFGA----------------------------------------PG-CVPELALGLGMG 265
            |.|.....|.                                        || .:.|.....|..
  Rat   174 LVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAA 238

  Fly   266 VNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330
            .:.....:.|:.||.|:..||..|||.|..::|||..||.::|.||.|||.|||.||||||.|.|
  Rat   239 GSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303

  Fly   331 KQLRRRDNANEPVDFSRSEPGKQP 354
            :.  :..|||.    ...||.:.|
  Rat   304 RV--KAGNANS----KTGEPSRNP 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)
Gbx2	NP_446160.1	Homeodomain	248..304	CDD:459649	31/55 (56%)