DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and VAX1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001106175.1 Gene:VAX1 / 11023 HGNCID:12660 Length:334 Species:Homo sapiens


Alignment Length:149 Identity:49/149 - (32%)
Similarity:66/149 - (44%) Gaps:27/149 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 APGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSE 315
            |.|.:.|:.|..|:.::     |.::.||.|:..||..||..|:..:|:...||.|||..|.|||
Human    82 AKGSIREIILPKGLDLD-----RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSE 141

  Fly   316 TQVKTWFQNRRMKHKKQLRRRDNANEPVDFSR---------------SEPGKQ---PGEATSSSG 362
            ||||.||||||.|.||...:.......|..:.               |.||..   |..||.:.|
Human   142 TQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALG 206

  Fly   363 DSKHG----KLNPGSVGGT 377
            .:..|    .|..|:..|:
Human   207 SALRGPSLPALGAGAAAGS 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 29/55 (53%)
VAX1NP_001106175.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
COG5576 66..184 CDD:227863 38/106 (36%)
Homeodomain 101..157 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..263
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..334
Blue background indicates that the domain is not in the aligned region.

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