DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and CDX4

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_005184.1 Gene:CDX4 / 1046 HGNCID:1808 Length:284 Species:Homo sapiens


Alignment Length:317 Identity:82/317 - (25%)
Similarity:118/317 - (37%) Gaps:85/317 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 HPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQH 176
            :|....|.....||.:.....|      |..|   |.||..:....|||.|             :
Human    14 YPGTLMSPGGDGTAGTGGTGGG------GSPM---PASNFAAAPAFSHYMG-------------Y 56

  Fly   177 PPVPTTQPQ--------PPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPS---SGTYK 230
            |.:|:..|.        .|..||....|      :|| .|.:..|.:.:.....||:   |..|.
Human    57 PHMPSMDPHWPSLGVWGSPYSPPREDWS------VYP-GPSSTMGTVPVNDVTSSPAAFCSTDYS 114

  Fly   231 SVDPYFLSQASLFGGAPFFGAPG-----CVP-ELALGLGMGVNALRHC----------------R 273
            ::.|       :.||......||     .|| :.........:..||.                .
Human   115 NLGP-------VGGGTSGSSLPGQAGGSLVPTDAGAAKASSPSRSRHSPYAWMRKTVQVTGKTRT 172

  Fly   274 RRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDN 338
            :.|.|.|::|.|...|||.|...||::...:.|||..|||||.|||.||||||.|.:|.::::.:
Human   173 KEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKIS 237

  Fly   339 ANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGT-PTQPTSEQQLQMCLMQQ 394
                 .|..|      |.:..|..||    ::||.:..| .|.|::.:..|...:||
Human   238 -----QFENS------GGSVQSDSDS----ISPGELPNTFFTTPSAVRGFQPIEIQQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 29/55 (53%)
CDX4NP_005184.1 Caudal_act 13..170 CDD:461413 38/191 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..40 7/33 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..155 7/34 (21%)
Homeodomain 175..230 CDD:459649 29/54 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..259 8/30 (27%)

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