Protein Alignment bsh and nkx6-3

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: XP_002932753.1
• Gene: nkx6-3 / 100489301
• XenbaseID: XB-GENE-478609
• Length: 255
• Species: Xenopus tropicalis
• Alignment Length: 324
• Identity: 84/324 - (25%)
• Similarity: 116/324 - (35%)
• Gaps: 109/324 - (33%)

  Fly   101 HPSQHSHPPQSHPPASASA---SATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNG 162
            ||.....||.|....|:..   :.|...:.|.:..|.                 |...||.|...
 Frog     5 HPGAFLLPPYSTEMKSSGCQFPAHTPFHKLNPSVLGC-----------------HLPSGTPHGIS 52

  Fly   163 DQISQQL-GSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLG--YLSP 224
            |.:|:.| .|.:...|..||.|           |.|:|:   .|.:.|.:.|.:....|  |.:.
 Frog    53 DILSRPLPASHSGMFPGYPTVQ-----------GYGSSS---VPGSCYGEQGSILTKSGTPYTNQ 103

  Fly   225 SSGTYKSVDPYF------LSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSD 283
            |.|.:..::..:      ||..|                         |.....|::..|..|:.
 Frog   104 SRGCWTDIEQDWRGGNRALSSVS-------------------------NTEGSSRKKHTRPTFTG 143

  Fly   284 PQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRS 348
            .|:..|||.||..:||:.|||..||.:||:||:|||.||||||.|.:|:             |..
 Frog   144 HQIFALEKTFEQTKYLAGPERARLAFSLGMSESQVKVWFQNRRTKWRKK-------------SAV 195

  Fly   349 EPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYS-DLEADSGDE 411
            |....|..:|...||     |.|           ||.:           .|:|| .|:.||.||
 Frog   196 ETPGLPSLSTRGPGD-----LTP-----------SENE-----------DDEYSKPLDPDSDDE 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	29/55 (53%)
nkx6-3	XP_002932753.1	Homeodomain	133..191	CDD:459649	30/57 (53%)