Protein Alignment bsh and hoxc10

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001258236.1
• Gene: hoxc10 / 100487723
• XenbaseID: XB-GENE-486915
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 311
• Identity: 78/311 - (25%)
• Similarity: 112/311 - (36%)
• Gaps: 68/311 - (21%)

  Fly    41 KTPFSIEHILFQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVKSARSAFAHDNN-PHKHPSQ 104
            |..:.||..:.:.|:|.|...|..:.|.....:.:   |.::||.::|    .:.|. |....|.
 Frog    84 KNTYRIEQPVARQLSSCSFPTNVKEENVCCMYSTD---KRAKNATEAA----LYPNQMPETRSSD 141

  Fly   105 HSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQIS--- 166
            |..|..|:               .:|:.||       ||..||..:......|:..|...:|
 Frog   142 HEVPVPSY---------------YRASQGY-------SMEKTPSCHTTGDFETTFENRTSVSARS 184

  Fly   167 ----QQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASN-----GVLYPNAPYTDHGFLQMTLGYL 222
                ||...|....|....|..|..........:.||:     .:..|..|.::        |..
 Frog   185 EILEQQQAGGKGGFPENTKTDNQSLATNLTTSSATASDIKTEKSLPAPKLPPSE--------GDK 241

  Fly   223 SPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLS 287
            .||..|..|.|.   |.|..........|.|             |.|.....||.|..::..|..
 Frog   242 EPSKNTDTSTDN---SDAEAKEDIKAENAAG-------------NWLTAKSGRKKRCPYTKHQTL 290

  Fly   288 GLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDN 338
            .|||.|....||:...|:|::.::.|::.|||.||||||||.||.  .|:|
 Frog   291 ELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKM--NREN 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	24/55 (44%)
hoxc10	NP_001258236.1	Homeodomain	278..334	CDD:459649	24/55 (44%)