Protein Alignment bsh and hoxc12

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 260
• Identity: 64/260 - (24%)
• Similarity: 87/260 - (33%)
• Gaps: 85/260 - (32%)

  Fly   101 HPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSN--------HHSRHGT 157
            :|..:...|.|..|:.:.|...|.....:.   |..|.......|..|.|        .||...:
 Frog    64 YPQPYLSSPVSINPSFSRACDLARVEETKC---YYREGCNPDTPSLKRENVLLPLESGIHSAMNS 125

  Fly   158 SHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGAS-------NGV------LYPNAPY 209
            :....|            :..|.:....||....|...||:|       |.|      ..|:.|
 Frog   126 TFQKYD------------YTAVDSVPHDPPSCQSLESDSGSSLLNEGTKNAVSEAATMASPSNP- 177

  Fly   210 TDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRR 274
                      |...|:|                  |||::..                   |.|.
 Frog   178 ----------GNSLPAS------------------GAPWYPI-------------------HTRS 195

  Fly   275 RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNA 339
            ||.|..:|..||:.||..|....:::...|.||:..|.||:.|||.|||||||| ||:|..|:.|
 Frog   196 RKKRKPYSKIQLAELEGEFMVNEFITRQRRRELSDRLSLSDQQVKIWFQNRRMK-KKRLLMREQA 259

  Fly   340  339
             Frog   260  259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	26/55 (47%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	27/56 (48%)