Protein Alignment bsh and Hoxb2

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 70/214 - (32%)
• Similarity: 94/214 - (43%)
• Gaps: 53/214 - (24%)

  Fly   166 SQQLGSGAAQHPPVPTTQP-------QPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLS 223
            |.|||:...|.|  .:.:|       :||||.|           :.|.||  :..:::.......
  Rat    56 SLQLGASTLQRP--GSQKPAGDGPALRPPPPLP-----------VAPPAP--EFPWMKEKKSAKK 105

  Fly   224 PSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSG 288
            ||.   .:..|   |.|:....|...|:|...|.|....|.|        .|:.||.:::.||..
  Rat   106 PSQ---SAATP---SPAASSVRASGVGSPSDGPGLPESGGSG--------SRRLRTAYTNTQLLE 156

  Fly   289 LEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRR-------------DNAN 340
            |||.|...:||..|.|||:|..|.|:|.|||.||||||||||:|.:.|             |:|.
  Rat   157 LEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPDGEPGGLSAQDDAG 221

  Fly   341 EPVDFSRSEPGKQPGEATS 359
            ||.:    ||...||:..|
  Rat   222 EPAE----EPTVSPGDVAS 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	31/55 (56%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	31/55 (56%)