DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Ventx

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_008771600.3 Gene:Ventx / 100361016 RGDID:2320944 Length:272 Species:Rattus norvegicus


Alignment Length:265 Identity:65/265 - (24%)
Similarity:96/265 - (36%) Gaps:85/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 PPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGA 251
            |..|.|...||..:. ..|:.|              |..||.:..::|..||..  :||..    
  Rat     3 PGLPTLRSPSGHPSH-QRPSTP--------------SSRSGFHVPIEPMALSDK--YGGKQ---- 46

  Fly   252 PGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSET 316
                        .|..|.|  :|||.||.:|..|.|.|::.|...:|....:.:|||:.:.::|.
  Rat    47 ------------TGPVAPR--KRRKERTQYSAKQKSVLQEHFAECQYPDKKQCLELASLVRVTEK 97

  Fly   317 QVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPG-EATSSSGDSKHGKLNPGS------- 373
            ::|.||:|.|.|.|::       |.|    .:.|.|..| ||.|.|.|.      |||       
  Rat    98 EIKVWFKNNRAKCKQK-------NVP----EALPEKNGGPEAVSGSTDF------PGSIAVVGCD 145

  Fly   374 -----------VGGTPTQPTSEQQ----------LQMCLMQQGYSTDDYSDLEADSGDEDNSSDV 417
                       |..||....|::.          ...||.:....::|    ...:||...|:.|
  Rat   146 QGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDSND----PVTAGDSGVSAPV 206

  Fly   418 DIVGD 422
            :...|
  Rat   207 EAQAD 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 20/55 (36%)
VentxXP_008771600.3 None

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