DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10631 and pita

DIOPT Version :9

Sequence 1:NP_609998.1 Gene:CG10631 / 35262 FlyBaseID:FBgn0032817 Length:3781 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:500 Identity:98/500 - (19%)
Similarity:161/500 - (32%) Gaps:150/500 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PYIKSEPMEAYQQPPNPMAPPPA----------------PEVLIKSEPIDEHSYKSNYIDDNTPF 237
            |...:||.|..::..|.||...:                |..:..|.|:...|:......||...
  Fly   122 PAKTAEPSETPKKLLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQE 186

  Fly   238 ADFSKFSEFSEDMLS---------PKVELTVKDESYGRTTSSFLR--------------RKQQSD 279
            ..........|||.|         |:....||.:...:::...|.              :.::.|
  Fly   187 LSMDDVQSMLEDMASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDD 251

  Fly   280 RGN---------ESLPI-------------------CQRCKEVFFKKQVY----LRHVAESNCGI 312
            .||         ..||:                   |..|:..|..:|:.    |.|.       
  Fly   252 SGNVAIVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHT------- 309

  Fly   313 QEYDFKCSTCPMSFMTTEELQRHKLHHRADRFFCHKYCGKHFDTIAECEAHEYMQHEYDSFVCNM 377
            :...|:|..|..||.:..:|.:|...|..:|.|....|.|.|...|....||....:...|:|..
  Fly   310 RSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVY 374

  Fly   378 CSGTFATREQLYAHLPQHKFQQRFDCPIC--RLWYQTALELHE--HRLAAPYFCGKYYTGGQSSS 438
            |...|.:|:::..|..:|:.::.|.|.:|  ...::..||.||  |....|:.|...    :.|.
  Fly   375 CEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHC----ERSF 435

  Fly   439 ASQSQAQQH------QTNYKLQDCHMATMEMPTTPHH-------KTTPSGSSLPAT------AAL 484
            ::.|:..:|      :..|..:.||.:.|    ..||       .|..|.:|...:      :..
  Fly   436 STASKLARHLVAHAGKRAYPCKYCHKSYM----LSHHLSRHLRTHTQTSDASFVCSECKVSYSNY 496

  Fly   485 NSLLQQRQANADGAAMFAASAMK-----------NEVNVKMERSYSNSTS--------------- 523
            |.||       |.|.:.|.:::|           :.|...|::...:...               
  Fly   497 NDLL-------DHALIHATASLKCPMCRKQIEDIDSVESHMDQHKQSERHACEFCDHIFLTQKCL 554

  Fly   524 ----ESSYSVQDSGYNNAYGSDSSMHAGAIAGPQAHSSTLDDSED 564
                |..:.|:...|.|.: .|.....|.:...:.|   |||.||
  Fly   555 QRHIEDDHVVEMEPYQNEF-EDDGEGEGGVDEKEEH---LDDFED 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10631NP_609998.1 C2H2 Zn finger 288..311 CDD:275368 6/26 (23%)
C2H2 Zn finger 319..339 CDD:275368 6/19 (32%)
DM3 584..642 CDD:128933
DM3 683..738 CDD:128933
DM3 775..832 CDD:128933
DM3 945..1000 CDD:128933
DM3 1038..1096 CDD:128933
DM3 1145..1198 CDD:128933
THAP 1236..1308 CDD:214951
DM3 1349..1406 CDD:128933
THAP 1424..1493 CDD:214951
DM3 1538..1596 CDD:128933
DM3 1683..1739 CDD:128933
DM3 1778..1831 CDD:128933
DM3 1980..2033 CDD:128933
DM3 2147..2202 CDD:128933
DM3 2308..2365 CDD:128933
DM3 2434..2491 CDD:128933
DM3 2539..2598 CDD:128933
DM3 2622..2680 CDD:128933
DM3 2718..2775 CDD:128933
DM3 2907..2965 CDD:128933
DM3 3098..3155 CDD:128933
DM3 3227..3284 CDD:128933
DM3 3396..3452 CDD:128933
DM3 3544..3601 CDD:128933
THAP 3621..>3669 CDD:283206
DM3 3690..3748 CDD:128933
pitaNP_611806.3 zf-AD 17..92 CDD:214871
COG5048 <281..506 CDD:227381 56/246 (23%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 328..353 CDD:290200 8/24 (33%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 428..448 CDD:275368 4/23 (17%)
C2H2 Zn finger 456..476 CDD:275368 5/23 (22%)
C2H2 Zn finger 486..506 CDD:275368 5/26 (19%)
HARE-HTH <566..625 CDD:294801 9/33 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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