DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10631 and CG17612

DIOPT Version :9

Sequence 1:NP_609998.1 Gene:CG10631 / 35262 FlyBaseID:FBgn0032817 Length:3781 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:315 Identity:72/315 - (22%)
Similarity:107/315 - (33%) Gaps:82/315 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 QPPNPMAPPPAPEVLIKSEPIDEHSYKSNYIDDNTPFADFSKFSEFSEDMLSPKVELTVKDESYG 265
            :||. :..|..|.:.:|...::.|.:             ..:.|:..|..|.|........:.: 
  Fly   317 EPPR-LKCPMCPSIYMKRGCLEAHMW-------------IHRASDERESELEPPYRCPHCPKLF- 366

  Fly   266 RTTSSFLR-----RKQQSDR-GNESLPICQRCKEVFFKKQVYLRHVAESNCGIQEYDFKCSTCPM 324
             ..||||.     .:..|.| ..:|...|.:|.:||........|| :.:.|  |..|||..|.|
  Fly   367 -LYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHV-KIHAG--ERTFKCPLCLM 427

  Fly   325 SFMTTEELQRHKLHHRADRFFCHKYCGKHFDTIAECEAHEYMQHEYDS-FVCNMCSGTFATREQL 388
            ||.....|:.|...|  .||.||| |.|.|::....:.|....|.... |.|..|..||..|..|
  Fly   428 SFQEESNLKSHDCAH--TRFKCHK-CSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGL 489

  Fly   389 YAHLPQH----------------------KFQ-------------------QRFDCPICRLWYQT 412
            ..|:...                      ||.                   :|.:|..|:..||.
  Fly   490 KEHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQN 554

  Fly   413 ALELHEHRLA-------APYFCGKY----YTGGQSSSASQSQAQQHQTNYKLQDC 456
            ...|.:|.|:       :..|..||    :|..||...:.|:.::: .|....:|
  Fly   555 KKLLTKHILSHNRCVHCSMSFTSKYLLEQHTCSQSYQLNGSRGRKN-PNLNYNEC 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10631NP_609998.1 C2H2 Zn finger 288..311 CDD:275368 6/22 (27%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
DM3 584..642 CDD:128933
DM3 683..738 CDD:128933
DM3 775..832 CDD:128933
DM3 945..1000 CDD:128933
DM3 1038..1096 CDD:128933
DM3 1145..1198 CDD:128933
THAP 1236..1308 CDD:214951
DM3 1349..1406 CDD:128933
THAP 1424..1493 CDD:214951
DM3 1538..1596 CDD:128933
DM3 1683..1739 CDD:128933
DM3 1778..1831 CDD:128933
DM3 1980..2033 CDD:128933
DM3 2147..2202 CDD:128933
DM3 2308..2365 CDD:128933
DM3 2434..2491 CDD:128933
DM3 2539..2598 CDD:128933
DM3 2622..2680 CDD:128933
DM3 2718..2775 CDD:128933
DM3 2907..2965 CDD:128933
DM3 3098..3155 CDD:128933
DM3 3227..3284 CDD:128933
DM3 3396..3452 CDD:128933
DM3 3544..3601 CDD:128933
THAP 3621..>3669 CDD:283206
DM3 3690..3748 CDD:128933
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 323..343 CDD:275370 4/32 (13%)
zf-C2H2_8 356..438 CDD:292531 23/86 (27%)
C2H2 Zn finger 359..379 CDD:275368 4/21 (19%)
C2H2 Zn finger 394..414 CDD:275368 6/20 (30%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 6/16 (38%)
C2H2 Zn finger 476..505 CDD:275368 7/28 (25%)
C2H2 Zn finger 513..533 CDD:275368 2/19 (11%)
C2H2 Zn finger 545..565 CDD:275368 7/19 (37%)
C2H2 Zn finger 568..584 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.