DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YB and NF-YB2

DIOPT Version :9

Sequence 1:NP_001286089.1 Gene:Nf-YB / 35261 FlyBaseID:FBgn0032816 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_199575.1 Gene:NF-YB2 / 834815 AraportID:AT5G47640 Length:190 Species:Arabidopsis thaliana


Alignment Length:112 Identity:62/112 - (55%)
Similarity:83/112 - (74%) Gaps:2/112 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EEDEASGDDSDKQDGGIML--REQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISF 80
            :.|...|.:.:.|:|...|  |||||||||.|:.:|||..:|.|.||:|||:|.:||||||||||
plant     5 DRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISF 69

  Fly    81 ISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRE 127
            ::.||.::...|.|||:||||||.|.:.|||::|||||.:|||::||
plant    70 VTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFRE 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YBNP_001286089.1 CBFD_NFYB_HMF 42..105 CDD:279185 38/62 (61%)
NF-YB2NP_199575.1 CBFD_NFYB_HMF 30..95 CDD:395650 39/64 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2683
eggNOG 1 0.900 - - E2759_KOG0869
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I1840
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1529111at2759
OrthoFinder 1 1.000 - - FOG0001364
OrthoInspector 1 1.000 - - otm2648
orthoMCL 1 0.900 - - OOG6_101084
Panther 1 1.100 - - O PTHR11064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X859
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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