DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YB and NF-YB3

DIOPT Version :9

Sequence 1:NP_001286089.1 Gene:Nf-YB / 35261 FlyBaseID:FBgn0032816 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_193190.1 Gene:NF-YB3 / 827101 AraportID:AT4G14540 Length:161 Species:Arabidopsis thaliana


Alignment Length:137 Identity:68/137 - (49%)
Similarity:87/137 - (63%) Gaps:18/137 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EASGDDSDKQDGG-IMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSE 84
            ::..|....:||| ...|||||||||.|:.:|||..:|.|.||:|||:|.:|||||||||||:.|
plant     3 DSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGE 67

  Fly    85 AIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPHNEDGSS 149
            |.::...|.|||:||||||.|.:.|||::|||||.:|||||||                 .:|..
plant    68 ASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYRE-----------------VEGEK 115

  Fly   150 ANDAGKQ 156
            ...||:|
plant   116 TTTAGRQ 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YBNP_001286089.1 CBFD_NFYB_HMF 42..105 CDD:279185 39/62 (63%)
NF-YB3NP_193190.1 CBFD_NFYB_HMF 24..89 CDD:395650 40/64 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2683
eggNOG 1 0.900 - - E2759_KOG0869
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I1840
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1529111at2759
OrthoFinder 1 1.000 - - FOG0001364
OrthoInspector 1 1.000 - - otm2648
orthoMCL 1 0.900 - - OOG6_101084
Panther 1 1.100 - - LDO PTHR11064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X859
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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