DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YB and Fam47c

DIOPT Version :10

Sequence 1:NP_609997.1 Gene:Nf-YB / 35261 FlyBaseID:FBgn0032816 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_001158211.1 Gene:Fam47c / 70864 MGIID:1918114 Length:430 Species:Mus musculus


Alignment Length:116 Identity:22/116 - (18%)
Similarity:46/116 - (39%) Gaps:33/116 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNSEDSQQYLNDMLVKEEDEASGDDSDKQDGGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKD 65
            :.:.||.::|::.:.:....|.|   |:|::     .|..|| |......:::...|:....||.
Mouse   170 VDHCEDRRKYIHSVHLPSVAEES---SEKEE-----PEPHRF-PGSRKYSMLQEKKPRKKNPAKQ 225

  Fly    66 A--RECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNY 114
            :  ...|.:.|.:|.::::|                      |.:||.|.:
Mouse   226 SLYYHHIPKGVYDFCAWVNS----------------------FGDLGIDEH 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YBNP_609997.1 HFD_NFYB 36..126 CDD:467032 15/81 (19%)
Fam47cNP_001158211.1 FAM47 1..>178 CDD:405345 2/7 (29%)

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