DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YB and Pole3

DIOPT Version :9

Sequence 1:NP_001286089.1 Gene:Nf-YB / 35261 FlyBaseID:FBgn0032816 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_067473.2 Gene:Pole3 / 59001 MGIID:1933378 Length:145 Species:Mus musculus


Alignment Length:110 Identity:34/110 - (30%)
Similarity:54/110 - (49%) Gaps:4/110 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 REQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDD 101
            |.:|..||...|.:|:|..:|....|:|:||..|....|.|:.:.:|.|...::...|||:|..|
Mouse     4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASD 68

  Fly   102 LLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPHNED 146
            :|.|...:.|..::.||...|:.||...|..:    :||....:|
Mouse    69 VLSAMEEMEFQRFITPLKEALEAYRREQKGKK----EASEQKKKD 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YBNP_001286089.1 CBFD_NFYB_HMF 42..105 CDD:279185 21/62 (34%)
Pole3NP_067473.2 H4 1..>105 CDD:304892 33/104 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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